December 11, 2015 - 3.23.2 - Bug Fix and Input Form Update
Features:
Developers may now configure their web applications to bypass the input form
Bug Fixes:
Fixed an issue related to using access tokens when accessing files in the Projects and AppSessions APIs
3.20.4
July 10, 2015 - 3.20.4 - Application Purchase Update
Bug Fixes
Application pricing restored for published apps
Developer site now retains test user order on details page
Developer site warns about unsaved changes
3.20.0
June 25, 2015 - 3.20.0 - Versioning of Apps
Features:
Storage Metering
Application Versioning
Updates:
Application Description Page Redesign
Developer Portal Redesign
Storage Metering
Users can now view overall storage information under My Account
Application Versioning
Multiple versions of applications in BaseSpace are now grouped together in a single location
New What's New section added to each version of an application, this section indicates any announcements for this application
New Release Notes section added to each version of an application, this section will include the latest updates included in this version of the application from the previous version
3.17.1
April 17, 2015 - 3.17.1 - Minor API Update
Minor API Update
Updated the users/{id}/runs API endpoint to now return any Runs in BaseSpace that were Locked during sequencing
3.20.3
July 3, 2015 - 3.20.3 - Versioning Update
Bug Fixes
Viewing results from unpublished applications
Dynamically updated app forms getting 403 on callback
3.15.1
March 03, 2015 - 3.15.1 - NeoPrep Support
New Features
NeoPrep now supports pooling of libraries produced from the NeoPrep instrument. (Instrument Owners Only)
- New HelpCenter is now default help link. The HelpCenter is a newly designed support site with an increasing amount of new articles and tutorials. See more [here](https://help.basespace.illumina.com "BaseSpace HelpCenter")
Bug Fixes
External html links can no longer be included in share comments
3.19.1
May 27, 2015 - 3.19.1 - Minor SAV Update
Minor SAV Update
This release contains a performance improvement for the Runs charts in BaseSpace
As part of the latest release of BaseSpace, we have identified a few bugs as follows:
Projects with any character other than alphanumeric, underscore (_
), or dash (
-
), will cause BCL2FASTQ 2.17 to fail. Since the latest BaseSpace release is using the same core algorithms, FASTQ Generation will fail if invalid characters are used. Users will see an error notification, and the log file will have details on the error.
As a temporary workaround: Users can remove the invalid characters OR make sure the column header in the SampleSheet Data section is called SampleProject NOT Sample_Project OR SAMPLE_PROJECT. PrepTab users with NextSeq will need to rename their Projects for the time being. Users will need to manually move Samples to existing Projects from newly created Projects.
For samples that have an underscore (_) in the name, the automatic conversion to a dash (-) in the file name, as occurred previously, is not occurring. As a result, a some apps may fail to launch.
A workaround for the time being is to rename the sample without the underscore, and requeue the FASTQ generation.
IGV is not opening projects and samples, because a BaseSpace API is failing.
We are working towards providing a fix for all of these as soon as possible.
Significant improvements to the job scheduler for all Native applications in BaseSpace
3.16.2
April 08, 2015 - 3.16.2 - App Launch API
New Features
3.17.0
April 11, 2015 - 3.17.0 - Download Experience
New Features
App Launch API: Added new POST: applications/{id}/appsessions endpoint to allow launching of Native Apps using the BaseSpace Rest API. More information is available in the API Reference
API Rate Limitations: Added rate limitations to the API, described in more detail here
LaunchSpace: Set of python scripts released by the BaseSpace team to allow BaseSpace users to automatically launch analysis on their samples as soon as they are ready. LaunchSpace is described in more detail in its github repository
Added Python SDK guide for launching Native Apps on your data, available in the Python SDK Overview
Download Experience
: Added new download dialog on run details and analysis details pages. Run details dialog allows download of all fastq files that were produced that you have access to. The analysis details allows filtering by all, BAM, and VCF.
Run Transfer: Failed runs can now be transferred to another owner.
3.19.0
May 21, 2015 - 3.19.0 - SAV Update
SAV Charts Overhaul
Pan And Zoom of Charts (Data by Cycle, Data by Lane, QScore)
Ability to "Fix Scale" of graphs to allow for apples-to-apples comparison for cycles and allow for trend-spotting.
Enhancements to "Run Summary" stats tables
Improved reporting of Demultiplex results
Overall speed improvements
As always, most of this data is available via our API, for example the "NextSeq-500-V2-Nextera-XT-384-plex-E-Coli" , you can see stats with these API calls:
December 09, 2015 - 3.23.1 - FASTQ Generation Name Verification and IGV Fixes
Bug Fixes:
Fixed issue preventing IGV from loading analyses to view
Give better warnings for invalid samplesheets that have unsupported characters
Performance improvements for sample details
Resolved issues launching RNAExpress 1.0
Notes:
The FASTQ generation application does not support some characters in a Project name. Please limit the characters you use in project names to alphanumeric, dashes, and underscores where possible.
3.16.0
March 30, 2015 - 3.16.0 - MSR conversion
New Features
MSR conversion: MSR v2.4.60.8 with the new look of reports. Reports for the last two supported MSR versions are re-generated.
BGZipped FASTQs can now be uploaded in web upload tool.
