Compatibility
Last Updated: July 2024
Document Version: 2
Terminology
IPP = Illumina Preset Protocol
CSW = Control Software
OSW = Operating Software
Instrument Integrations
iScan
Module = BaseSpaceLIMS-SIS-iScan
Version
Workflow version
Clarity LIMS version
Other Compatibilities
1.2.0
Multiple (iLASS Infinium v1.1)
6.2.0 and above
CSW 4.2.1
IPP 2.9.0 and above
SIS Core 2.4.0
1.1.0¹
Multiple (iLASS Infinium v1.0)
6.2.0 and above
CSW 4.2.1
IPP 2.6.0 and above
SIS Core 2.4.0
MiSeq
Module = ClarityLIMS-Illumina-MiSeq-Package-v8
Version
Workflow version
Clarity LIMS version
Other Compatibilities
8.3.0
3.2
6.2.0 and above
CSW 4.0.0, 4.1.0
IPP 2.9.0 and above
8.2.0
3.2
6.2.0 only
CSW 4.0.0, 4.1.0
IPP 2.6.0 and above
MiSeqDx
Module = BaseSpaceLIMS-miseqdx-sequencing-service, BaseSpaceLIMS-miseqdx-extensions
ℹ️ Workflow is part of extensions RPM.
Version
Workflow version
Clarity LIMS version
Other Compatibilities
1.11.0
1.2
6.2.0 and above
OSW 1.1.7
NGS 5.23.0
1.10.0
1.2
6.2.0 only
OSW 1.1.7
NGS 5.23.0
NextSeq 500/550
Module = ClarityLIMS-Illumina-NextSeq-Package-v2
Version
Workflow version
Clarity LIMS version
Other Compatibilities
2.4.0
1.2
6.2.0 and above
CSW 4.0.0
IPP 2.6.0 to IPP v2.9.0
2.3.0
1.1
6.2.0 only
CSW 4.0.0
IPP 2.6.0 and above
NextSeq 1000/2000
Hosted
Module = BaseSpaceLIMS-SIS-Nextseq1k2k
Version
Workflow version
Clarity LIMS version
Other Compatibilities
2.5.1
2.4
6.2.0 and above
CSW 1.5.0
Requires BSSH (Personal/Professional/Enterprise)
IPP 2.8.0 and above
SIS Core 2.6.0
(Optional) UPA and UPA Script 1.3.1
2.5.0
2.4
6.2.0 and above
CSW 1.5.0
Requires BSSH (Personal/Professional/Enterprise)
IPP 2.8.0 and above
SIS Core 2.6.0
(Optional) UPA and UPA Script 1.2.0
2.4.0¹
2.3
6.2.0 and above
CSW 1.5.0
Requires BSSH (Personal/Professional/Enterprise)
IPP 2.6.0 and above
SIS Core 2.4.0
(Optional) UPA and UPA Script 1.2.0
On-Prem
Module = BaseSpaceLIMS-SIS-Nextseq1k2k-OnPremise
Version
Workflow version
Clarity LIMS version
Other Compatibilities
1.0.0
1.0
6.2.0 and above
IPP 2.8.0 and above
CSW 1.5.0
NovaSeq 6000
API-based
Module = BaseSpaceLIMS-sequencer-api
Version
Workflow version
Clarity LIMS version
Other Compatibilities
3.7.0
3.8
6.2.0 and above
CSW 1.8.0
IPP 2.6.0 and above
Sequencer API 2.7.0
(Optional) UPA and UPA Script 1.2.0
3.6.0
3.8
6.2.0 and above
CSW 1.8.0
IPP 2.6.0 and above
Sequencer API 2.6.0
(Optional) UPA and UPA Script 1.2.0
File-based
Module = BaseSpaceLIMS-novaseq-sequencing-service, BaseSpaceLIMS-novaseq-extensions
ℹ️ Workflow is part of extensions RPM.
Version
Workflow version
Clarity LIMS version
Other Compatibilities
2.6.0
2.3
6.2.0 and above
CSW 1.5.0
NGS 5.23.0
2.5.0
2.3
6.2.0 only
CSW 1.5.0
NGS 5.23.0
NovaSeq 6000Dx
Module = BaseSpaceLIMS-sequencer-api
Version
Workflow version
Clarity LIMS version
Other Compatibilities
1.3.0
1.2
6.2.0 and above
OSW 2.3.1
IPP 2.6.0 and above
Sequencer API 2.7.0
1.2.0
1.2
6.2.0 and above
OSW 2.3.1
IPP 2.6.0 and above
Sequencer API 2.6.0
NovaSeq X Series
Module = BaseSpaceLIMS-SIS-NovaSeqXSeries
Version
Workflow version
Clarity LIMS version
Other Compatibilities
1.2.1¹
1.1
6.2.0 and above
CSW 1.0.0
Requires BSSH (Professional/Enterprise)
IPP 2.7.0 and above
SIS Core 2.5.0
(Optional) UPA and UPA Script 1.3.1
1.2.0¹
1.1
6.2.0 and above
CSW 1.0.0
Requires BSSH (Professional/Enterprise)
IPP 2.7.0 and above
SIS Core 2.5.0
(Optional) UPA 1.2.0 and UPA Script 1.2.1
x
1.1.0¹
1.1
6.2.0
CSW 1.0.0
Requires BSSH (Professional/Enterprise)
IPP 2.6.0 and above
SIS Core 2.4.0
(Optional) UPA and UPA Script 1.2.0
Other Integration Modules
Illumina Preset Protocol
Module = BaseSpaceLIMS-Illumina-Preset-Protocols
Version
Clarity LIMS version
Other Compatibilities
2.9.0
6.2.0 and above
NGS 5.25.0
2.8.0
6.2.0 and above
NGS 5.25.0
2.7.0
6.2.0 and above
NGS 5.24.0
2.6.0
6.2.0 and above
NGS 5.23.0
NGS Extension
Module = Clarity LIMS-NGS-Package-v5
Version
Clarity LIMS version
Other Compatibilities
5.25.0
6.2.0 and above
5.24.0
6.2.0 and above
5.23.0
6.2.0 and above
Sequencer-API
Module = BaseSpaceLIMS-sequencer-api
Version
Clarity LIMS version
Other Compatibilities
2.7.0
6.2.0 and above
2.6.0
6.2.0 and above
SIS-Core
Module = BaseSpaceLIMS-SIS-Core
Version
CLIMS version
Other Compatibilities
2.6.0
6.2.0 and above
2.5.0
6.2.0 and above
2.4.0
6.2.0 and above
UPA
UPA
Module = BaseSpaceLIMS-unified-product-analytics
Version
CLIMS version
Other Compatibilities
1.3.1
6.2.0 and above
1.3.0¹
6.2.0 and above
1.2.0¹
6.2.0 and above
UPA Script
Module = BaseSpaceLIMS-unified-product-analytics-scripts
Version
CLIMS version
Other Compatibilities
1.3.1
6.2.0 and above
UPA v1.3.0
1.3.0
6.2.0 and above
UPA v1.3.0
1.2.1
6.2.0 and above
UPA v1.2.0
1.2.0
6.2.0 and above
UPA v1.2.0
Revision History
Version
Changes
2
Updated Compatibility of NextSeq 500/550.
1
Initial release.
Last updated