TMB JSON Full

{
    "TmbPerMb": 3.14823318,
    "AdjustedTmbPerMb": 3.14823318,
    "NonsynonymousTmbPerMb": 3.14823318,
    "AdjustedNonsynonymousTmbPerMb": 3.14823318,
    "SomaticCodingVariantsCount": 4,
    "NonsynonymousSomaticCodingVariantsCount": 4,
    "TotalRegionSizeMb": 1.881725,
    "CodingRegionSizeMb": 1.270554,
    "Settings": {
        "JsonPath": "/opt/illumina/analysis-folder/Logs_Intermediates/Annotation/SeraCare-TriLevelv2-DNA/SeraCare-TriLevelv2-DNA_DNAVariantsTMB_Annotated.json.gz",
        "TmbInputRegions": "/opt/illumina/analysis-folder/Logs_Intermediates/SmallVariantFilter/SeraCare-TriLevelv2-DNA/SeraCare-TriLevelv2-DNA_SmallVariants.genome.vcf",
        "IncludedRegions": "/opt/illumina/resources/Refseq.CodingRegions.hg19.bed",
        "ExcludedRegions": "/opt/illumina/resources/pepe2/pepe_blacklist.bed",
        "OutputDir": "/opt/illumina/analysis-folder/Logs_Intermediates/Tmb/SeraCare-TriLevelv2-DNA",
        "LowerVafThreshold": 0.05,
        "UpperVafThreshold": 1.0,
        "CosmicDriverThreshold": 50,
        "VariantTypes": ["SNV","deletion","insertion"],
        "DepthThreshold": 50,
        "CorrectionSlope": 1.0,
        "CorrectionIntercept": 0.0,
        "SkipProxiFilter": false,
        "DbFilterThreshold": 10
    }
}