# Lab QC Tab

The Lab QC tab within a case provides basic assay, workflow, and output metrics. If a case was created from merging DNA and RNA, then DNA and RNA tabs are selectable before the Overview section.

## Overview Legend

| **Field Name**   | **Description**                                                            |
| ---------------- | -------------------------------------------------------------------------- |
| Source           | Description                                                                |
| Assay            | The name of the assay as specified in the uploaded metrics file.           |
| Output Date      | The output date of the run as specified in the uploaded metrics file.      |
| Output Time      | The output time of the run as specified in the uploaded metrics file.      |
| Workflow Version | The workflow version of the run as specified in the uploaded metrics file. |
| Module Version   | The module version of the run as specified in the uploaded metrics file.   |
| Run ID           | The ID of the run as specified in the uploaded metrics file.               |
| Run Name         | The name of the run as specified in the uploaded metrics file.             |

## Run QC Metrics

Run QC Metrics displays metrics used for the run as specified in the uploaded metrics file.

| **Field Name**   | **Description**                                                                                                                              |
| ---------------- | -------------------------------------------------------------------------------------------------------------------------------------------- |
| Source           | Description                                                                                                                                  |
| Metric           | Metrics used for the run as specified in the uploaded metrics file.Examples include total percentage of reads passing filter and Q30 scores. |
| Lower Spec Limit | Lower specification limit for metric as specified in the uploaded metrics file.                                                              |
| Upper Spec Limit | Upper specification limit for the metric as specified in the uploaded metrics file.                                                          |
| Value            | The value of the metric as specified in the uploaded metrics file.                                                                           |
| Pass Status      | Indicates whether the metric passed the spec limits as specified in the uploaded metrics file.                                               |

## Sample QC Metrics

Sample QC Metrics displays metrics used for the sample as specified in the uploaded metrics file.

| **Field Name**   | **Description**                                                                                                                          |
| ---------------- | ---------------------------------------------------------------------------------------------------------------------------------------- |
| Source           | Description                                                                                                                              |
| Section          | The section for each set of metrics as specified in the uploaded metrics file. Examples include DNA sample QC and RNA sampleQC.          |
| Group            | The group for the metrics as specified in the uploaded metrics file(for example, read group).                                            |
| Metric           | Metrics used for the sample as specified in the uploaded metrics file. Examples include median exon coverage and median fragment length. |
| Lower Spec Limit | Lower specification limit for the metric as specified in the uploaded metrics file.                                                      |
| Upper Spec Limit | Upper specification limit for the metric as specified in the uploaded metrics file.                                                      |
| Sample/Pair ID   | The sample/pair ID of the case.                                                                                                          |