> For the complete documentation index, see [llms.txt](https://help.connected.illumina.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://help.connected.illumina.com/dragen-array/product-guides/dragen-array-cloud-analysis.md).

# DRAGEN Array Cloud Analysis

DRAGEN Array Cloud utilizes the user-friendly graphical interface of BaseSpace Sequence Hub to simplify DRAGEN Array analysis setup and kickoff. Optional integration with the iScan System allows data to be streamed directly from the instrument to the cloud platform. Analysis data is stored on the Illumina Connected Platform providing secure storage for both microarray and sequencing data.

This documentation is organized into two main sections:

## [Analysis Type Details](/dragen-array/product-guides/dragen-array-cloud-analysis/overview.md)

Learn about the specific configuration options, quality control recommendations, and requirements for each type of analysis supported by DRAGEN Array Cloud. Each analysis type has unique settings and best practices that help ensure optimal results.

[View Analysis Type Details →](/dragen-array/product-guides/dragen-array-cloud-analysis/overview.md)

## [BaseSpace Operations](/dragen-array/product-guides/dragen-array-cloud-analysis/overview-1.md)

Step-by-step guidance for using BaseSpace Sequence Hub to run DRAGEN Array analyses, including setup, launching analyses, viewing outputs, managing data, and troubleshooting.

[Get Started with BaseSpace →](/dragen-array/product-guides/dragen-array-cloud-analysis/overview-1.md)


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