Advanced Topics

This section covers advanced cloud deployment features for the DRAGEN Solid WGS Tumor Normal Pipeline on Illumina Connected Analytics (ICA).

Rerunning Analyses

You can rerun a completed analysis using the "Rerun" option in ICA. This feature allows you to:

• Quickly repeat an analysis with the same parameters

• Modify specific settings without reconfiguring the entire analysis

• Validate results or troubleshoot issues

Command Line Interface

For advanced users and automation workflows, you can use the ICA Command Line Interface (CLI) to launch and manage analyses programmatically. The CLI provides:

• Automation: Script and automate analysis launches

• Batch Processing: Process multiple samples efficiently

• Integration: Incorporate DRAGEN analyses into custom pipelines

• Flexibility: Complete any analysis performed through the UI directly from the command line

The CLI installation guide provides detailed instructions for setup on Mac, Linux, and Windows platforms.