> For the complete documentation index, see [llms.txt](https://help.connected.illumina.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://help.connected.illumina.com/dragen-stratamap/illumina-connected-multiomics/spatial-analysis/re-analysis.md).

# Re-analysis

In order to re-analyze data that was generated upstream in the DRAGEN Spatial Transcriptome software, click the rectangle indicating the task, then click "Rerun task" from the task menu.

<figure><img src="/files/XjDmK4XoO39MTYfb9u7Y" alt=""><figcaption></figcaption></figure>

A new page will open with the parameters that can be adjusted from the defaults used for the original analysis. Make changes as needed and click "Finish" to submit the new task.

The new task will be a different color and be placed in parallel to the original.

### New Spatial plot with Re-Analysis Results

Within the Data Viewer tab, select "Start a new session". Select "Setup", "New plot", then "Spatial plot". In the options for the data select the new data, it will likely be a different color from the original default blue.

<figure><img src="/files/srx2k6Oxo6a1MmXkbXz5" alt=""><figcaption></figcaption></figure>

<figure><img src="/files/RBARiI4z5iSP9C3AkaJ6" alt=""><figcaption></figcaption></figure>

It should pre-select spatial\_x and spatial\_y for the x and y axes. Click "Add" to add the data. The spatial image should load for the background automatically.


---

# Agent Instructions
This documentation is published with GitBook. GitBook is the documentation platform designed so that both humans and AI agents can read, navigate, and reason over technical content effectively. Learn more at gitbook.com.

## Querying This Documentation
If you need additional information that is not directly available in this page, you can query the documentation dynamically by asking a question.

Perform an HTTP GET request on the current page URL with the `ask` query parameter, and the optional `goal` query parameter:

```
GET https://help.connected.illumina.com/dragen-stratamap/illumina-connected-multiomics/spatial-analysis/re-analysis.md?ask=<question>&goal=<endgoal>
```

`ask` is the immediate question: it should be specific, self-contained, and written in natural language.
`goal` is optional and describes the broader end goal you are ultimately trying to accomplish on behalf of the user. GitBook uses it to tailor the answer towards what is most useful for that goal.

The response will contain a direct answer to the question and relevant excerpts and sources from the documentation.

Use this mechanism when the answer is not explicitly present in the current page, you need clarification or additional context, or you want to retrieve related documentation sections.
