The following table lists the genes that have associated block listed sites. For the exact location of the block listed site, contact Illumina Technical Support.
ABL1
5
FGFR2
144
PAX7
5
AKT2
5
FGFR3
1
PAX8
275
AKT3
20
FGFR4
36
PBRM1
3
ALK
90
FLCN
2
PDCD1
2
ANKRD11
6
FLI1
36
PDGFRA
5
ANKRD26
9
FLT1
91
PDGFRB
2
AR
81
FLT4
3
PDK1
1
ARID1A
40
FOXA1
48
PDPK1
6
ARID1B
87
FOXL2
4
PGR
5
ARID2
1
FOXO1
2
PHF6
2
ASXL1
3
FOXP1
3
PHOX2B
15
ASXL2
5
FUBP1
1
PIK3C2G
2
ATM
2
GATA4
6
PIK3CA
18
ATR
3
GATA6
12
PIK3CB
42
ATRX
17
GEN1
1
PIK3R1
6
AURKA
1
GID4
3
PIK3R2
2
AXIN2
4
GNAQ
4
PLCG2
3
AXL
74
GNAS
11
PLK2
2
BBC3
2
GPR124
3
PMAIP1
7
BCL10
2
GRM3
1
PMS2
1
BCL2L11
16
H3F3A
1
POLE
3
BCOR
2
H3F3C
2
PPARG
446
BCORL1
1
HGF
1
PRDM1
1
BCR
64
HIST1H1C
2
PRKCI
2
BIRC3
1
HLA-A
72
PRKDC
5
BLM
4
HNF1A
2
PTCH1
13
BMPR1A
4
HNRNPK
9
PTEN
41
BRAF
283
HOXB13
1
PTPRS
14
BRCA1
49
HSP90AA1
4
PTPRT
2
BRCA2
21
ICOSLG
6
QKI
2
BRD4
16
IFNGR1
2
RAD21
1
CARD11
4
iIndel
91
RAD50
5
CASP8
2
INHBA
4
RAD51
18
CBL
8
INPP4A
1
RAD51B
8
CCND1
25
INPP4B
1
RAF1
98
CCND3
49
IRS1
9
RANBP2
12
CCNE1
72
IRS2
19
RARA
2
CD74
50
iSNP
4
RASA1
1
CDH1
4
JAK2
4
RB1
5
CDK12
3
JUN
7
RBM10
13
CDK4
46
KAT6A
5
RECQL4
3
CDK6
13
KDM5A
7
REL
3
CDK8
4
KDM5C
2
RET
3
CDKN2B
2
KDM6A
2
RFWD2
22
CEBPA
12
KDR
1
RICTOR
1
CHD2
5
KIF5B
7
ROS1
287
CHD4
12
KIT
5
RPS6KA4
3
CHEK1
75
KMT2B
51
RPS6KB1
109
CHEK2
64
KMT2C
118
RUNX1
3
chrY
93
KMT2D
108
SDHA
18
CIC
2
KRAS
44
SDHB
3
CREBBP
4
LAMP1
64
SDHD
17
CSNK1A1
4
LATS1
1
SETBP1
7
CTNNB1
1
LATS2
4
SETD2
26
CUL3
1
LoH
85
SF3B1
1
CUX1
9
LRP1B
3
SH2B3
4
DAXX
5
LZTR1
1
SH2D1A
2
DDR2
1
MAGI2
2
SLIT2
1
DDX41
1
MALT1
4
SLX4
2
DIS3
2
MAP2K2
1
SMARCA4
4
DNAJB1
6
MAP2K4
5
SMC1A
1
DNMT1
1
MAP3K1
8
SMC3
8
DNMT3A
4
MAP3K14
2
SMO
2
DOT1L
2
MAP3K4
10
SOX10
7
E2F3
70
MAPK1
6
SOX17
1
EGFR
304
MAPK3
6
SOX9
14
EIF4E
12
MCL1
1
SPEN
4
EML4
9
MDC1
23
STAG1
5
EP300
1
MDM2
53
STAG2
2
ERBB2
14
MDM4
67
STAT4
1
ERBB3
62
MED12
28
STAT5A
1
ERCC1
53
MGA
6
STAT5B
4
ERCC2
57
MLL
9
SUFU
5
ERCC3
4
MLLT3
18
SUZ12
9
ERCC5
4
MRE11A
5
TAF1
9
ERG
2
MSH3
10
TBX3
1
ESR1
32
MSH6
2
TCEB1
1
ETS1
45
MSI
148
TCF3
2
ETV1
862
MST1
18
TCF7L2
6
ETV4
502
MYB
402
TERT
2
ETV5
11
MYC
78
TET1
1
ETV6
187
MYCL1
28
TET2
23
EWSR1
364
MYCN
69
TFE3
299
EZH2
2
MYOD1
3
TFRC
33
FANCA
1
NAB2
10
TGFBR1
6
FANCD2
11
NCOA3
28
TGFBR2
2
FANCG
10
NCOR1
9
TMEM127
5
FANCI
1
NF1
3
TMPRSS2
236
FANCL
1
NKX2-1
4
TOP2A
1
FAT1
2
NOTCH1
4
TP53
22
FBXW7
4
NOTCH3
7
TRAF7
4
FGF1
25
NOTCH4
9
TSC1
4
FGF10
17
NPM1
5
TSC2
1
FGF14
15
NRAS
29
U2AF1
1
FGF19
102
NRG1
47
VEGFA
7
FGF2
26
NTRK1
134
WISP3
2
FGF23
38
NTRK2
145
WT1
10
FGF3
60
NTRK3
13
XIAP
1
FGF4
25
NUTM1
134
XPO1
2
FGF5
14
PAK1
68
XRCC2
1
FGF6
9
PAK3
8
YAP1
1
FGF7
9
PALB2
1
ZBTB7A
11
FGF8
30
PARK2
23
ZFHX3
56
FGF9
21
PARP1
2
ZNF703
7
FGFR1
26
PAX3
156
ZRSR2
2
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