For the complete documentation index, see llms.txt. This page is also available as Markdown.

Illumina Assay to DRAGEN Cloud Pipeline Mapping

This table identifies the appropriate DRAGEN pipeline for analyzing data output from Illumina assay kits. Visit Illumina BioInsight Platform Core or Illumina BaseSpace Sequence Hub for more information on accessing DRAGEN pipelines in the cloud.

Assay
DRAGEN Pipeline

Illumina Spatial Transcriptome Prep, FF (L) Cloud

DRAGEN Spatial Transcriptome

Illumina Spatial Transcriptome Prep, FF (S) Cloud

DRAGEN Spatial Transcriptome

Illumina Spatial Transcriptome Prep, FF (L) Cloud Starter

DRAGEN Spatial Transcriptome

Illumina Spatial Transcriptome Prep, FF (S) Cloud Starter

DRAGEN Spatial Transcriptome

ILMN Protein Prep 9.5k Plasma 96 Reactions

DRAGEN Protein Quantification

ILMN Protein Prep 9.5k Serum 96 Reactions

DRAGEN Protein Quantification

Illumina 5-Base DNA Prep (24 Samples) Early Access

DRAGEN Germline: 5-Base

Illumina 5-Base DNA Prep with Enrichment (24 Samples) Early Access

DRAGEN Enrichment: 5-Base

Illumina 5-Base DNA Prep (24 Samples)

DRAGEN Germline: 5-Base

Illumina 5-Base DNA Prep with Enrichment (24 Samples)

DRAGEN Enrichment: 5-Base

Illumina Single Cell 3' RNA Prep, T2 (8 samples, 2000 cells/sample)

DRAGEN Single Cell RNA: T2

Illumina Single Cell 3' RNA Prep, T10 (8 samples, 10,000 cells/sample)

DRAGEN Single Cell RNA: T10

Illumina Single Cell 3' RNA Prep, T20 (4 samples, 20,000 cells/sample)

DRAGEN Single Cell RNA: T20

Illumina Single Cell 3' RNA Prep, T100 (2 samples, 100,000 cells/sample)

DRAGEN Single Cell RNA: T100

Illumina Single Cell CRISPR Prep, T10 (8 samples, 10,000 cells/sample)

DRAGEN Single Cell CRISPR: T10

Illumina Single Cell CRISPR Prep, T100 (2 samples, 100,000 cells/sample)

DRAGEN Single Cell CRISPR: T100

Illumina Single Cell CRISPR Prep, M1 (1 sample, 1 million cells/sample)

DRAGEN Single Cell CRISPR: M1

Illumina Single Cell CRISPR Prep, M10 (10 samples, 1 million cells/sample)

DRAGEN Single Cell CRISPR: M10

The 8 sample Constellation SKU + Flowcell

DRAGEN Germline: Constellation

The 2 sample Constellation SKU + Flowcell

DRAGEN Germline: Constellation

Ribo-Zero Plus Mcrbm Dpltn Kit, 96

DRAGEN Microbiome Metatranscriptomics

ILMN VSP V2 Kit, Set A (96 spl)

DRAGEN Microbial Enrichment Plus

ILMN VSP V2 Kit, Set B (96 spl)

DRAGEN Microbial Enrichment Plus

ILMN VSP V2 Kit, Set C (96 spl)

DRAGEN Microbial Enrichment Plus

ILMN VSP V2 Kit, Set D (96 spl)

DRAGEN Microbial Enrichment Plus

IMAP with MiniSeq Core Cons Kit 48 smp

DRAGEN Microbial Amplicon

IMAP with MiSeq Core Cons Kit 48 smp

DRAGEN Microbial Amplicon

Illumina Microbial Amplicon Prep, 48 sample

DRAGEN Microbial Amplicon

lLMN Microb Amp Prep Infl. A/B (48 Spl)

DRAGEN Microbial Amplicon

Resp Virus Enrich Kit A (96 idx,96 spl)

DRAGEN Microbial Enrichment Plus

Resp Virus Enrich Kit B (96 idx,96 spl)

DRAGEN Microbial Enrichment Plus

Resp Virus Enrich Kit C (96 idx,96 spl)

DRAGEN Microbial Enrichment Plus

Resp Virus Enrich Kit D (96 idx,96 spl)

DRAGEN Microbial Enrichment Plus

RPIP Enrich Kit (RUO)(96 idx,96 spl)-A

DRAGEN Microbial Enrichment Plus

RPIP Enrich Kit (RUO)(96 idx,96 spl)-B

DRAGEN Microbial Enrichment Plus

RPIP Enrich Kit (RUO)(96 idx,96 spl)-C

DRAGEN Microbial Enrichment Plus

RPIP Enrich Kit (RUO)(96 idx,96 spl)-D

DRAGEN Microbial Enrichment Plus

RPIP with MiSeq Core Cons Kit 96 smp

DRAGEN Microbial Enrichment Plus

RPIP with NS1K2K Core Cons Kit 96 smp

DRAGEN Microbial Enrichment Plus

Urinary Path. ID/AMR Enrichment Kt SetA

DRAGEN Microbial Enrichment Plus

Urinary Path. ID/AMR Enrichment Kt SetC

DRAGEN Microbial Enrichment Plus

VSP w ILMN RNA Prep w Enrich A, 96 Rxns

DRAGEN Microbial Enrichment Plus

VSP w ILMN RNA Prep w Enrich B, 96 Rxns

DRAGEN Microbial Enrichment Plus

VSP with MiniSeq Core Cons Kit 96 smp

DRAGEN Microbial Enrichment Plus

VSP with MiSeq Core Cons Kit 96 smp

DRAGEN Microbial Enrichment Plus

ILMN VSP V2 Panel (96 spl)

DRAGEN Microbial Enrichment Plus

RESP. VIRUS OLIGO PANEL v2

DRAGEN Microbial Enrichment Plus

Viral Surveillance Panel, RUO 96 rxns

DRAGEN Microbial Enrichment Plus

IDT ILMN UMI DNA/RNA UDI A Lig 96Id96Spl

DRAGEN ILMN cfDNA prep w/Enrichment

IDT ILMN UMI DNA/RNA UDI B Lig 96Id96Spl

DRAGEN ILMN cfDNA prep w/Enrichment

TruSight Oncology Comprehensive (EU) Kit

TruSight Oncology Comprehensive (LRM)

TruSight Oncology DNA Control

TruSight Oncology Comprehensive (LRM)

TruSight Oncology RNA Control

TruSight Oncology Comprehensive (LRM)

TruSight Onco 500 DNA Kt (48 Spl)

DRAGEN TSO 500

TruSight Onco 500 DNA Kt, NSQ (48 Spl)

DRAGEN TSO 500

TruSight Onco 500 DNA/RNA Kt,NSQ(24 Spl)

DRAGEN TSO 500

TruSightOnco 500 DNA Auto Kt,NSQ(64 Spl)

DRAGEN TSO 500

TS Onc 500 DNA HT (144 Spl)

DRAGEN TSO 500

TS Onc 500 DNA/RNA HT (72 Spl)

DRAGEN TSO 500

TSO 500 ctDNA Kit (48 smpl) + Velsera

DRAGEN TruSight Oncology 500 ctDNA

TSO 500 ctDNA v2 (24 spls)

DRAGEN TruSight Oncology 500 ctDNA

TSO 500 ctDNA v2 + S2 (24 spls)

DRAGEN TruSight Oncology 500 ctDNA

TSO 500 ctDNA v2 + S4 (24 spls)

DRAGEN TruSight Oncology 500 ctDNA

TSO 500 ctDNA v2 Auto (48 spls)

DRAGEN TruSight Oncology 500 ctDNA

TSO 500 ctDNA v2 Auto + S4 (48 spls)

DRAGEN TruSight Oncology 500 ctDNA

TSO 500 DNA HT (48 Spl)+Velsera

DRAGEN TSO 500

TSO 500 DNA/RNA Auto Kt,NSQ(32 Spl)

DRAGEN TSO 500

TSO 500 DNA/RNA HT (24 Spl)+Velsera

DRAGEN TSO 500

TSO 500 DNA/RNA HT (72 Spl)+Velsera

DRAGEN TSO 500

TSO500 DNA Kit (48 samples)+Velsera

DRAGEN TSO 500

TSO500 DNA Kit NextSeq (48Spl)+Velsera

DRAGEN TSO 500

TSO500 DNA/RNA Auto Kt NSQ(32) + Velsera

DRAGEN TSO 500

TSO500 DNA/RNA HT Auto (32 spls)+Velsera

DRAGEN TSO 500

TSO500 DNA/RNA HT Auto(72 spls)+Velsera

DRAGEN TSO 500

TSO500 DNA/RNA Kit (24Spl)+Velsera

DRAGEN TSO 500

TSO500 DNA/RNA Kit NextSeq (24)Velsera

DRAGEN TSO 500

TSO500 DNA/RNA Kit NextSeq (24) plus Illumina Connected Insights Software

DRAGEN TSO 500

TSO500 DNA/RNA HT Auto (32 spls) plus Illumina Connected Insights Software

DRAGEN TSO 500

TSO 500 DNA/RNA HT (24 Spl) plus Illumina Connected Insights Software

DRAGEN TSO 500

TSO500 DNA/RNA Auto Kt NSQ(32) plus Illumina Connected Insights Software

DRAGEN TSO 500

TruSight Oncology 500 ctDNA v2 (24 samples) plus Connected Insights Interpretation Report

DRAGEN TruSight Oncology 500 ctDNA

TruSight Oncology 500 ctDNA v2 for Automation (48 samples) plus Connected Insights Interpretation Report

DRAGEN TruSight Oncology 500 ctDNA

TruSight Oncology 500 ctDNA v2 plus Connected Insights Interpretation Report, for use with NovaSeq 6000 S2 (24 samples)

DRAGEN TruSight Oncology 500 ctDNA

TruSight Oncology 500 ctDNA v2 plus Connected Insights Interpretation Report, for use with NovaSeq 6000 S4 (24 samples)

DRAGEN TruSight Oncology 500 ctDNA

TruSight Oncology 500 ctDNA v2 Automation Kit plus Connected Insights Interpretation Report, for use with NovaSeq 6000 S2 (48 samples)

DRAGEN TruSight Oncology 500 ctDNA

TruSight Oncology 500 ctDNA v2 Automation Kit plus Connected Insights Interpretation Report, for use with NovaSeq 6000 S4 (48 samples)

DRAGEN TruSight Oncology 500 ctDNA

oncoReveal Myeloid Panel plus Illumina Connected Insights software

DRAGEN Amplicon Pipeline

oncoReveal Multi-Cancer CNV + Fusion plus Illumina Connected Insights software

DRAGEN Amplicon Pipeline

oncoReveal BRCA1 & BRCA2 + CNV plus Illumina Connected Insights software

DRAGEN Amplicon Pipeline

oncoReveal Essential MPN Panel plus Illumina Connected Insights software

DRAGEN Amplicon Pipeline

TruSight Oncology Comprehensive

TruSight Oncology Comprehensive (LRM)

TSO 500 ctDNA v2 +S4 +Velsera (24 spls)

DRAGEN TruSight Oncology 500 ctDNA

oncoReveal BRCA1 & BRCA2 + CNV plus Correlation Engine software (24 samples)

DRAGEN Amplicon Pipeline

oncoReveal Essential MPN Panel plus Correlation Engine software (24 samples)

DRAGEN Amplicon Pipeline

oncoReveal Multi-Cancer CNV + Fusion plus Correlation Engine software (48 samples)

DRAGEN Amplicon Pipeline

oncoReveal Myeloid Panel plus Correlation Engine software (24 samples)

DRAGEN Amplicon Pipeline

oncoReveal Essential LBx Panel plus Correlation Engine software (24 samples)

DRAGEN Amplicon Pipeline

oncoReveal Core LBx Panel plus Correlation Engine software (24 samples)

DRAGEN Amplicon Pipeline

oncoReveal Fusion LBx Panel plus Correlation Engine software (24 samples)

DRAGEN Amplicon Pipeline

oncoReveal Multi-Cancer + Fusion Panel plus Correlation Engine software (24 samples)

DRAGEN Amplicon Pipeline

oncoReveal Solid Tumor v2 Panel plus Correlation Engine software (24 samples)

DRAGEN Amplicon Pipeline

oncoReveal Essential LBx Panel plus Illumina Connected Insights software (24 samples)

DRAGEN Amplicon Pipeline

oncoReveal Core LBx Panel plus Illumina Connected Insights software (24 samples)

DRAGEN Amplicon Pipeline

oncoReveal Fusion LBx Panel plus Illumina Connected Insights software (24 samples)

DRAGEN Amplicon Pipeline

oncoReveal Multi-Cancer + Fusion Panel plus Illumina Connected Insights software (24 samples)

DRAGEN Amplicon Pipeline

oncoReveal Solid Tumor v2 Panel plus Illumina Connected Insights software (24 samples)

DRAGEN Amplicon Pipeline

TruSight Oncology 500 DNA High-Throughput Kit (144 Samples), plus Velsera

DRAGEN TSO 500

TruSight Oncology 500 DNA Automation Kit plus Velsera interpretation report (16 indexes, 64 samples)

DRAGEN TSO 500

TruSight Oncology 500 DNA/RNA Automation Kit plus Velsera interpretation report (16 indexes, 32 Samples)

DRAGEN TSO 500

TruSight Oncology 500 High-Throughput DNA for Automation (64 Samples), Plus Velsera

DRAGEN TSO 500

TruSight Oncology 500 High-Throughput DNA for Automation (144 Samples), Plus Velsera

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Kit (24 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA Kit (48 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Automation Kit (32 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA Automation Kit (64 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Automation Kit (96 samples)

DRAGEN TSO 500

TSO 500 v2 DNA/RNA Kit NSQ (24 spl)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA Kit, For Use with NextSeq 550 (48 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Automation Kit, For Use with NextSeq 550 (32 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA Automation Kit, For Use with NextSeq 550 (64 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Kit, For Use with NextSeq 1000/2000 P2 (24 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA Kit, For Use with NextSeq 1000/2000 P2 (48 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Automation Kit, For Use with NextSeq 1000/2000 P2 (32 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA Automation Kit, For Use with NextSeq 1000/2000 P2 (64 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Kit plus Velsera interpretation report (24 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA Kit plus Velsera interpretation report (48 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Automation Kit plus Velsera interpretation report (32 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA Automation Kit plus Velsera interpretation report (64 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Automation Kit plus Velsera interpretation report (96 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Kit plus Velsera interpretation report, For Use with NextSeq 550 (24 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA Kit plus Velsera interpretation report, For Use with NextSeq 550 (48 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Automation Kit plus Velsera interpretation report, For Use with NextSeq 550 (32 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA Automation Kit plus Velsera interpretation report, For Use with NextSeq 550 (64 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Kit plus Velsera interpretation report, For Use with NextSeq 1000/2000 P2 (24 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA Kit plus Velsera interpretation report, For Use with NextSeq 1000/2000 P2 (48 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Automation Kit plus Velsera interpretation report, For Use with NextSeq 1000/2000 P2 (32 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Kit plus Illumina Connected Insights Software (24 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA Kit plus Illumina Connected Insights Software (48 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Automation Kit plus Illumina Connected Insights Software (32 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA Automation Kit plus Illumina Connected Insights Software (64 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Automation Kit plus Illumina Connected Insights Software (96 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Kit plus Illumina Connected Insights Software, For Use with NextSeq 550 (24 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA Kit plus Illumina Connected Insights Software, For Use with NextSeq 550 (48 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Automation Kit plus Illumina Connected Insights Software, For Use with NextSeq 550 (32 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA Automation Kit plus Illumina Connected Insights Software, For Use with NextSeq 550 (64 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Kit plus Illumina Connected Insights Software, For Use with NextSeq 1000/2000 P2 (24 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA Kit plus Illumina Connected Insights Software, For Use with NextSeq 1000/2000 P2 (48 samples)

DRAGEN TSO 500

TruSight Oncology 500 v2 DNA/RNA Automation Kit plus Illumina Connected Insights Software, For Use with NextSeq 1000/2000 P2 (32 samples)

DRAGEN TSO 500

TSO 500 ctDNA v2 + P4 (24 spls)

DRAGEN TruSight Oncology 500 ctDNA

TSO 500 ctDNA v2 Auto + S2 (48 spls)

DRAGEN TruSight Oncology 500 ctDNA

TSO 500 ctDNA v2 + Velsera (24 spls)

DRAGEN TruSight Oncology 500 ctDNA

TSO 500 ctDNA v2 Auto + Velsera(48 spls)

DRAGEN TruSight Oncology 500 ctDNA

TSO 500 ctDNA v2 +P4 +Velsera (24 spls)

DRAGEN TruSight Oncology 500 ctDNA

TSO 500 ctDNA v2 +S2 +Velsera (24 spls)

DRAGEN TruSight Oncology 500 ctDNA

TSO 500 ctDNA v2 Auto+S2+Velsera(48spls)

DRAGEN TruSight Oncology 500 ctDNA

TSO 500 ctDNA v2 Auto+S4+Velsera(48spls)

DRAGEN TruSight Oncology 500 ctDNA

TruSight Oncology 500 ctDNA v2 plus Illumina Connected Insight Software (24 spls)

DRAGEN TruSight Oncology 500 ctDNA

TSO 500 v2 DNA Auto Kit ICI P2 (64 spl)

DRAGEN TSO 500

TSO500 DNA Auto Kt NSQ(64Spl)+Velsera

DRAGEN TSO 500

oncoReveal Myeloid Panel

DRAGEN Amplicon Pipeline

oncoReveal Multi-Cancer CNV + Fusion

DRAGEN Amplicon Pipeline

oncoReveal BRCA1 & BRCA2 + CNV

DRAGEN Amplicon Pipeline

oncoReveal Essential MPN Panel

DRAGEN Amplicon Pipeline

oncoReveal Essential LBx Panel

DRAGEN Amplicon Pipeline

oncoReveal Core LBx Panel

DRAGEN Amplicon Pipeline

oncoReveal Fusion LBx Panel

DRAGEN Amplicon Pipeline

oncoReveal Multi-Cancer Fusion Panel

DRAGEN Amplicon Pipeline

oncoReveal Solid Tumor v2 Panel

DRAGEN Amplicon Pipeline

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