Sequencing information

Select a coverage BED

A coverage BED file is used to calculate and determine quality control (QC) metrics for your case. This file defines the genomic regions that should meet coverage requirements during sequencing.

BED files defining custom kits can be added in Organization settings > Kit management. Furthermore, the BED file chosen here is linked to a PON (Panel of Normals) file when starting from FASTQs and conducting CNV calling.

After selecting a coverage BED file, the available reference sequences for this kit will be displayed.

Specify sample preparation details

Specify details such as laboratory name, sequencing machine used, sequencing reagent kit, and expected coverage.