For the complete documentation index, see llms.txt. This page is also available as Markdown.

Analysis tools tab

The Analysis tools tab is the primary workspace for reviewing and interpreting variants within a case.

The Analysis tools tab includes:

  • Variant table: Displays variants with key annotations, quality metrics, and interpretation details in a table.

  • Filtering panel: Allows you to narrow results using filters and presets.

  • Variant visualization tool (v100.39.0+): Enables visual inspection of a variant's genomic context in a genome viewer built into the Analysis tools tab. The Variant visualization tool is available for RUO cases when the New viewing mode of the Analysis tools tab is enabled.

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Variant table

Explanation of Variant table functionality, including column definitions, row formatting, customization, bulk actions, and data export.

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Filtering panel

Overview of the filtering infrastructure used during case review, including filters, presets, preset groups, and variant search.

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Viewing modes (v100.39.0+)

Switch between New and Legacy viewing modes for Analysis tools tab. New mode includes an integrated variant visualization window above the variant table.

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