For the complete documentation index, see llms.txt. This page is also available as Markdown.

Variant type filters

Variant type filters enable analysts to concentrate on specific variant types. This streamlines the workflow by grouping variants that share the same analytical logic and evaluation approach.

Small variants:

  • SNV

  • Indel

  • MNV (v100.39.0+)


Structural variants:

  • DEL

  • DUP

  • INS


  • Mitochondrial SNV/Indel


  • STR

  • Haplotype variant

  • LOH/ROH (v37.0+)

Default values

When filters are reset to default, the Variant type filters are not applied.

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