# NGS sample quality metrics

<table data-header-hidden><thead><tr><th width="299.72735595703125">NGS case</th></tr></thead><tbody><tr><td><a href="/pages/jwQxUeWHTEgboG4EE0XQ">Sample quality</a> (overall)</td></tr><tr><td><a href="/pages/bWEk0pLlaz5G3h3CnLpu">Sex validation</a></td></tr><tr><td><a href="/pages/rXwU1ji2QcC3bWRyGalJ">Ploidy</a>*</td></tr><tr><td><a href="/pages/nlZafTT115lFLrjHmpVI">Contamination</a></td></tr><tr><td><p><a href="/pages/iZsdI4IsHVL41p89e5BB">Coverage metrics</a>:</p><ul><li>Average coverage</li><li>% Bases with coverage >10x</li><li>% Bases with coverage >20x</li></ul></td></tr><tr><td><a href="/pages/fieMyYqzGVNrXAJnXqmI">% Mapped reads</a></td></tr><tr><td><a href="/pages/NH9edu9F4d3V3ZpHh4xp">Error rate</a></td></tr></tbody></table>

\*<sub>*Available only for whole genome FASTQ cases.*</sub>


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