Variant tagging widget

Variant tags are shown in the Variant tagging widget of the Variant page Top bar.

When a variant is tagged by a user, the user's tag is displayed in the tag field. If the variant is only tagged by AI Shortlist and not by a user, the tag AI Shortlist is displayed. If a variant has not been tagged, the tag is shown as N/A.

Note: After a case reanalysis, all variants appear as not viewed.

A variant can be tagged by the AI Shortlist or a user as:

• Most Likely Candidate - most promising for solving the case

• Candidate - worth considering

• Incidental - meets the ACMG criteria for reporting secondary findings

• Carrier - identified by the Carrier analysis pipeline

• In Report - manually selected to be reported

• Not relevant - automatically tagged variant that has been disregarded after manual review

• Any custom tag used in your organization (e.g., Submitted for Sanger confirmation)

Variant tagging widget how-to

Add or change a tag

Click on the dropdown icon in the Variant tag field and select a suitable tag. The Variant tag field showcases the most recently assigned tag.

Review the tagging history

Click on the Variant tag field and scroll to the Assigned tags section.

Remove an automatic tag

Click on the dropdown array in the Variant tag field and select Not relevant.

Clear your manual tag:

Click on the dropdown array in the Variant tag field and select Clear.

Note: you can't clear a tag added by another user.