Transcript card

Card contents

The Transcript card on the Curate Gene page shows:

• Canonical transcript and its exon count. Indicated by a checkmark symbol ()
• Organization preferred reference transcript and its exon count. Indicated by a star symbol ()
• A Copy button to copy transcript ID

During tertiary analysis in Emedgene, the reference transcript selected in Curate takes priority. It determines the main_effect and main_gene for each variant in that gene.

How to update a gene's reference transcript

Updating a gene's reference transcript in Transcript card.

Use the dropdown menu to select or change the reference transcript.

1

Open the reference transcript dropdown in the Transcript card.

2

Select the reference transcript you want to apply.

Result: The reference transcript is updated for the gene and used in future case annotations.