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Known Issues

  • Studies with sample groups cannot be deleted without those sample groups being deleted first.

  • Auto-ingest of Illumina Spatial sample data from an ICA project periodically may not complete. For the most consistent performance, users are recommended to import their data manually.

  • Analyses periodically may hang in "in progress" status, requiring users to start a new analysis.

  • Running BANKSY on multiple spatial samples in the same node is not possible if the cell IDs are not unique. Please use the 'Split by attribute' function before running the task on each node individually.

  • We are aware that a change in random seed may cause differences when reproducing a BANKSY analysis performed with ICM 1.0. We have no reason to believe this affects the accuracy of the results. For more details, please visit the user guide page for BANKSY and the original publication.

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Known Limitations

  • Some non-Illumina commercial assay data is not supported in Connected Multiomics at this time.

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