LogoLogo
Illumina KnowledgeIllumina SupportSign In
  • Home
  • Overview
    • Welcome
    • What's New
      • Cloud Software Update
      • Local Software Update
  • Configure
    • Configuration
      • Custom Case Data
      • Pipeline and QC Configuration
      • Preferred Transcripts
      • Custom Annotations
      • Disease Configuration
      • Variant Filters
      • Variant Flag Groups
      • Actionability Classifications
      • Report Templates
        • Customizations
      • Report Automation
      • Test Definitions
      • Data Upload
        • Data Upload from User Storage (Connected Insights - Cloud and Connected Insights - Local)
        • Data Upload from ICA or BSSH (Connected Insights - Cloud)
        • Supported Pipelines
          • DRAGEN TruSight Oncology 500 Analysis Software v2.6.0 (with HRD)
          • DRAGEN TruSight Oncology 500 Analysis Software v2.6.0
          • DRAGEN TruSight Oncology 500 Analysis Software v2.5.3 (with HRD)
          • DRAGEN TruSight Oncology 500 Analysis Software v2.5.3
          • DRAGEN TruSight Oncology 500 Analysis Software v2.5.2 (with HRD)
          • DRAGEN TruSight Oncology 500 Analysis Software v2.5.2
          • DRAGEN TruSight Oncology 500 Analysis Software v2.1.1 (with HRD)
          • DRAGEN TruSight Oncology 500 Analysis Software v2.1.1
          • DRAGEN TruSight Oncology 500 ctDNA Analysis Software v2.6.1
          • DRAGEN TruSight Oncology 500 ctDNA Analysis Software v2.6.0
          • DRAGEN TruSight Oncology 500 ctDNA Analysis Software v2.5.0
          • DRAGEN TruSight Oncology 500 ctDNA Analysis Software v2.1.1
          • DRAGEN Amplicon v4.3
          • DRAGEN Amplicon v4.2
          • DRAGEN Amplicon v4.1
          • DRAGEN RNA v4.3
          • DRAGEN RNA v4.2
          • DRAGEN RNA v4.1
          • DRAGEN Enrichment v4.3
          • DRAGEN Enrichment v4.2
          • DRAGEN Enrichment v4.1
          • DRAGEN for Illumina cfDNA Prep with Enrichment v4.0.3
          • DRAGEN Somatic Whole Genome v4.3
          • DRAGEN Somatic Whole Genome v4.2
          • DRAGEN Somatic Whole Genome v4.1
          • TruSight Tumor 170 Local App v2.0.1
          • Local Run Manager TruSight Tumor 15 Analysis Module v2.1
        • Custom Pipeline Configuration
          • VCF Input Requirement
          • TMB, MSI, GIS Input Requirement
        • Custom Case Data Upload
    • Upload Assertions
    • Local Installation Guide
      • Overview
      • Prerequisites
      • Download Connected Insights Package
      • Install Connected Insights Software
      • Install License File
      • Sign In to Connected Insights
      • Installation Status Messages
      • Local Configurations
      • Administration Console (Connected Insights - Local)
      • Configure External Storage (Connected Insights - Local)
  • Manage cases
    • Cases Page
    • Cases List
      • Case Metadata Upload
  • Interpret and report
    • Case Page
    • Case Details
      • Merge Cases
    • Overview Tab
      • Classification & Risk Stratification Prediction
    • Visualize Tab
    • Variants Tab
      • Modify Columns
      • Apply Variant Filters
        • Filter by Variant Category
        • Variant Details Filters
        • Variant Quality Filters
        • Functional Impact Filters
        • Disease Association Filters
        • Variant Frequency Filters
        • Flags Filter
        • Filtering Logic
      • IGV Visualizations
    • Lab QC Tab
    • Report Tab
    • View Biomarker Details
      • Biological Classification
      • Actionability
      • Clinical Trials
      • Oncogenicity Prediction
      • Visualize
      • Variant Overview
      • Gene Overview
      • Cancer Datasets
      • Computer Predictors
      • Population
    • Interpret a Biomarker
      • Create Clinical Trials
      • Create Gene Descriptions
      • Manage Assertions
    • Variant Transcripts
    • Add Variant
  • Resources and References
    • Glossary
    • APIs
      • Ingest Cloud Analysis Data API (Connected Insights - Cloud Only)
      • Case APIs
      • Report APIs
      • Audit Log APIs
    • Troubleshooting
      • Overview
      • Audit Log
      • Data Backup (Connected Insights - Local)
      • Software Errors and Corrective Actions
      • How To
      • Technical Assistance
    • Pricing and Usage
    • Security and Compliance
    • Release Notes
Powered by GitBook
On this page
  • Upload Case Metadata
  • View Case Metadata Upload History

Was this helpful?

Export as PDF
  1. Manage cases
  2. Cases List

Case Metadata Upload

PreviousCases ListNextCase Page

Last updated 19 hours ago

Was this helpful?

From the Case List, you may upload case metadata files to update the metadata for existing cases or create new cases if those cases do not already exist. Cases created in this way will be in an Awaiting Molecular Data status until secondary analysis output data is associated to the samples of those cases, see for details on uploading molecular data. For more information on the custom case data format, refer to .

Upload Case Metadata

Upload a case metadata file as follows:

  1. From the Case List, select + New Case.

  2. Select the Import from CSV File option and click the button for Import from CSV File.

  3. [Optional] Download the attached template and input the desired case metadata to upload.

  4. Select a case metadata file to upload (up to five files may be uploaded at one time).

  5. Select Proceed.

View Case Metadata Upload History

  1. From the Case List, select Upload Case Metadata.

  2. Select View Past Uploads from the dropdown.

  3. [Optional] Select Refresh Uploads to refresh the status and details for uploaded files.

  4. [Optional] Download CSVs containing a record of problematic rows for files that were not successfully processed.

Data Upload Configuration
Custom Case Data Upload