Accessing Cloud Results

Primary Metrics

To view primary metrics:

1. Go to the relevant BaseSpace Sequence Hub (BSSH) workgroup.

2. Navigate to the "Runs" tab and select the run.

3. The "Summary" tab gives an overview of the sequencing run quality (e.g., average %Q30, %PF Yield).

4. Navigate to "Metrics" for detailed per lane information on all sequencing metrics.

Secondary Results

To view the analysis associated with a specific sequencing run:

1. Navigate to the "Summary" tab of the relevant run.

2. Click on the link below "Latest Analysis" (displaying the results from the latest analysis processed to the run data). For re-queued/re-analyzed runs, the previously completed analyses can be found under the "Prior Analysis" section

3. Click on "Reports" and find the quality metrics associated with the secondary analysis on the run data.

Note: Those who have access to an ICA account and want to view results on ICA may either click on "View Files in ICA" in the top right corner of your BSSH Analysis page or directly access the analysis in ICA. The secondary analysis results in ICA will be in a BSSH-managed project with the same name as the BSSH workgroup where the analysis was performed.

For further information on tracking and viewing run and analysis results in BaseSpace Sequence Hub, refer to the BSSH View Data documentation.