Illumina Protein Prep Automation System Output Files

The Illumina Protein Prep Automation System Output File (IPPAS output file) is a .csv file that's produced after automated library prep is completed. It contains the following fields:

Column Header	Description
Sample ID	Identifier per sample. Specified in Sample Manifest prior to automation.
Well position	Well position of the sample. Specified in Sample Manifest prior to automation.
Project	Optionally contains information about what project output a file should contain. See Lane Splitting and Multi-Analysis by Project for more details.
PlateBarcode	Barcode associated with plate. Specified in Sample Manifest prior to automation.
BatchID	User-provided batch identifier
InputType	Sample input type, either plasma, serum, plamsa_calibrator, serum_calibrator, plasma_QC, serum_QC, or blank. Specified in Sample Manifest prior to automation.
MatrixTubeBarcode	Barcode associated with matrix tube. Specified in Sample Manifest prior to automation.
ControlID	Lot number for associated calibrator, QC, or blank sample. Specified in Sample Manifest prior to automation.
ProbePlate	Proteomics Probe Plate barcode scanned during Proteomics Assay.
SOMAmerBeadPlate	SOMAmer-Bead Plate Dil 1 barcode.
Lanes	Optionally contains information about lane splitting. See Lane Splitting and Multi-Analysis by Project for more details.