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DRAGEN Single Cell RNA
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DRAGEN Single Cell RNA
  • Introduction
  • Get Started
    • Prerequisites
  • Run Set Up
    • Sample Sheet Introduction
    • Run Planning in BaseSpace Sequence Hub
    • Sample Sheet Requirements
    • Manual Launch on BaseSpace
  • Analysis Methods
    • FASTQ Processing
    • Error Correction
    • Transcript Counting
    • PIPseq CRISPR Mode
  • Analysis Results
    • Accessing Results
    • DRAGEN Report
      • Single-Cell RNA
      • Single-Cell Clustering
      • Trimmer
      • DRAGEN FastQC
      • Mapping
    • Secondary Analysis Results
  • Tertiary Analysis
    • Illumina Connected Multiomics
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  1. Analysis Results

DRAGEN Report

PreviousAccessing ResultsNextSingle-Cell RNA

Last updated 4 months ago

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Every run of Illumina DRAGEN Single Cell software produces a DRAGEN report in HTML format which includes QC metrics for trimming, mapping, and single cell analysis as well as a barcode rank plot. Below is a description of metrics and plots on each tab of the DRAGEN report.

Single-Cell RNA
DRAGEN-FastQC
Mapping
Trimmer