While adding a new case, you will build a pedigree and annotate each of the samples with data required for analysis (Add new case page > Family tree screen).
After the case has been created, the family tree is available in the Case details panel (righthand panel of the Cases page).
Icon fill color in other pedigree members indicates the presence or absence of the proband's phenotypes in a present sample (regardless of the potential presence of additional unrelated phenotypes):
Filled - the individual is affected by all of the proband's phenotypes;
Half-filled - the individual is affected by some of the proband's phenotypes;
Empty - the individual is not affected by any of the proband's phenotypes.
Icon color intensity denotes whether sample files have been uploaded for the particular individual:
Full color - the sample has files loaded in the case;
Faded color - no sample files are available.
Icon line type indicates whether the sample is considered or excluded during analysis (relevant to samples with uploaded files only):
Solid - the sample is included in the analysis;
Dashed - the sample is ignored by Inheritance filters and the AI Shortlist algorithm, but you still can explore its genotypes.
