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Clarity LIMS v6.2 & Lablink v2.4
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Clarity LIMS v6.2 & Lablink v2.4
  • Release Notes Clarity LIMS v6.2
    • Release Notes Clarity LIMS v6.2.1
    • Release Notes Clarity LIMS v6.2.0
  • Technical Overview
    • Technical Requirements
  • Installation
    • Installation Procedure
    • Guide to Secret Management
    • Install/Upgrade Secret Management for Integration Modules
    • Change the Clarity LIMS Hostname
    • Update Server Passwords and Database Connection Details
  • On-Premise Depolyments
    • Pre-Installation Requirements
      • Install a Purchased SSL/TLS Certificate
      • Configure Your HashiCorp Vault
    • On Premise to On Premise Upgrade Procedures
    • On Premise to Cloud Upgrade Procedures
    • Hosted to On Premise Upgrade Procedures
  • Adminstration
    • Database Cleanup Procedure
    • Receiving and Decrypting Cloud Backup Data
    • LDAP Integration
      • Using the LDAP Checker Tool
    • Clarity LIMS Log Files
    • Customize the Term Used for Projects
    • Enforcing Unique Sample Names Within a Project
    • Container Name Uniqueness
    • Creating Enrypted Passwords
    • Config Slicer Tool
      • Managing Configurations with Config Slicer
      • Upgrading a configuration package/manifest file for compatibility with Config Slicer v3.0.x
      • Config Slicer Use Cases
      • Troubleshooting Config Slicer
    • Audit Trail
    • Automation Worker Nodes
      • Troubleshooting Automation Worker
  • Clarity LIMS v6.2 Reference Guide
    • Dashboards
      • Overview Dashboard
      • Projects Dashboard
    • Projects and Samples
      • Projects
      • Samples Accessioning
        • Sample List for Batch Import
        • Guidelines and Tips for Batch Sample Import
      • Assign and Process Samples
    • Lab View
      • Requeue and Rework Samples
      • Storing Sample Aliquots for Later Use
      • Modifying Completed Step Details
      • Alert Notifications
    • Configuration
      • Lab Work
        • Steps and Master Steps
          • Step Milestones
          • Derived Sample Naming Convention Tokens
        • Protocols
        • Workflows
      • Consumables
        • Reagents
        • Controls
        • Instruments
        • Labels
        • Containers
      • Custom Fields
      • User Management
        • Manage User Access
        • User Roles
        • Configured Role-Based Permissions
        • User and Profile Page
      • Automations
        • Automation Trigger Configuration
        • Copy Custom Fields from Step Input to Output
        • Template Files Associated With Automations
    • Automated Quality Control
      • Configure a QC System
    • Search
      • Basic Search
      • Advanced Search
    • Genealogy View
    • System Performance
      • Queue Performance and Usability
      • Demultiplexing API Endpoint Performance
    • Terms and Definitions
  • LabLink v2.4 Reference Guide
    • Project
      • Email Notifications for Notes
    • Resource Materials & Contact Us
    • Users
    • Configuration
    • Publishing Files and Progress
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  1. Clarity LIMS v6.2 Reference Guide

Automated Quality Control

The Clarity LIMS automated QC system is configurable. This allows administrators to determine which QC master steps and steps are required for aggregation, the criteria to apply to each master step/step, and the field values to be copied up to aggregation.

The following features are provided:

  • Preconfigured protocols for DNA Initial QC and RNA Initial QC that include master step templates for Bioanalyzer, NanoDrop, Qubit, PicoGreen, CaliperGX, TapeStation, and Aggregate QC.

  • Custom field-based storage of key QC results for both automated and spreadsheet-based manual storage.

  • Custom field-based criteria (Source Data Field, Operator, and Threshold Value) for QC steps that allow for automatic assignment of QC flags triggered on the storage of a QC result file.

  • QC protocol filter configuration that allows you to determine to which QC step samples are queued and which must be completed before aggregation can occur.

  • Automated aggregation of QC results and assignment of QC flags, from individual step right up to the sample undergoing QC, with the option of using custom field-based configuration to update Concentration (and other fields) from a particular QC result.

  • Easy access to individual sample QC measurements and flags, allowing you to review results, see the criteria evaluated, and the resulting QC flags assigned.

  • Excel-based log files, attached to the aggregation step, clearly show the criteria evaluated, the resulting QC flag assigned, and which individual QC test results were used to update the custom field values on the sample undergoing QC.

PreviousTemplate Files Associated With AutomationsNextConfigure a QC System

Last updated 9 months ago

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