Local Specific Output
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Common output files for cloud and local pipelines are described in the .
On DRAGEN server, Nextflow logs are contained in the Work folder in a hierarchical folder structure organized by the tasks in the pipeline_trace.txt. These files are prefixed with "." and hidden from normal view.
Work — (DRAGEN server only) - Contains information and files related to Nextflow execution
.command.log - Contains Nextflow pipeline step execution log.
.command.out - Contains Nextflow pipeline step standard output log.
.command.err - Contains Nextflow pipeline step standard error log.
.exit.code - Contains Nextflow pipeline step execution exit code.