Software Release Notes

This page contains the release notes for the current release. See the subpages for historic release notes.

Fixed issue where Docker Image sizes were displayed lower than they actually were. There had no impact on costs or data durability.

2026 MAY 26 - ICA v2.46.1

Fixed Issues

• General

  • Fixed an issue which caused Genome Viewer to not respond to the settings (gear icon) button to configure tracks and prevented users from toggling tracks.

2026 May 20 - ICA v2.46.0

New Features and Enhancements

• General

  • Users can now retrieve the input form (inputform.json) for proprietary pipelines via the API

    /projects/{projectId}/pipelines/{pipelineId}/inputForm/inputFormFile, to support autolaunch use cases.

• Base

  • -

• Bench

  • -

• Cohorts

  • -

• Data Management

  • -

• Flow

  • S3 and HTTP URLs can now be provided as file inputs for JSON-inputForm pipelines both in

    the ICA web UI and as default values in the pipeline definition (previously only supported

    via the API).

  • Improved error messages for pipelines imported from Git. For example;

    Invalid nextflow workflow project - main file not found or is unexpected file type (main.nf)

    |For questions about this import, contact Illumina Support with your pipeline URL and import run ID: <runId>

  • The analysis timeline now shows an ‘Environment provisioning’ internal task while AWS resources are being set up, making it clearer when a scheduled analysis is waiting on infrastructure rather than stalled.

  • The Genome Viewer tabs in the analysis detail page now appear immediately.

Fixed Issues

• General

  • Fixed an issue when loading a drop-down with many entities (for example, Base Table Add

    Data > Job history) so that the view no longer runs out of memory.

  • Fixed an issue when executing POST/api/projects/{projectId}/pipelines:createNextflowPipeline with a duplicate name/code (and no API-version header), so that the endpoint now returns a clear 409 validation error instead of an internal error.

  • Fixed an issue in the Swagger documentation for POST/api/projects/{projectId}/pipelines/{pipelineId}:clone, so that the documented response code now correctly reads 200 to match actual API behavior.

  • Fixed an issue when saving auto-populated operationId details in the ‘Edit api endpoint filter’ dialog, so that the populated details are now persisted correctly for all APIs.

• Base

  • Fixed an issue when adding a file with a long path to a Base table, so that temporary

    credentials are now obtained correctly, and the Base load job succeeds.

• Bench

  • Fixed an issue when running Create tool while the workspace image had been deleted, so

    that a clear error is shown instead of an unexpected error.

  • Fixed an issue when deleting a Bench Docker image that is still in use, so that the confirmation dialog now clearly warns that the image is in use.

• Cohorts

  • -

• Data Management

  • Fixed an issue when searching for ‘/’ in the search box (for example in the linking-data

    dialog), so that results are now filtered by path as expected.

  • Fixed an issue when the initial Key prefix was left empty, so that creating a new storage

    configuration no longer shows an incorrect ‘The combination of bucketName and keyPrefix

    already exists’ error.

  • Fixed an issue when displaying CSV files with multi-line quoted cell content in the Data section, so that the cell is now shown correctly instead of being split across multiple cells.

  • Search now supports filtering by file or folder path, in addition to the existing name and tag fields, in both the data search endpoint and the UI.

• Flow

  • Fixed an issue when choosing an analysis folder as the log folder, so that the folder tree in

    Output files can now be expanded as expected.

  • Fixed an issue when archiving or deprecating a pipeline and confirming with the Enter key,

    so that the optional message entered in the dialog is now saved.

  • Fixed an issue when launching a CWL-XML analysis with a float value for a longType input,

    so that the API now returns a clear validation error instead of an unexpected error in the

    UI.

  • Fixed an issue when running a batch copy against a source project with data sharing disabled, so that the ‘Not allowed to copy this folder’ error now includes a clearer explanation of why the copy was blocked.

  • Fixed an issue when importing a Git pipeline with a name longer than the length limit, so that a clear validation error is shown instead of an opaque transaction-commit error.

  • Fixed an issue when a transient caching error occurred during validation of a public-repo Git pipeline run, so that the workflow continues and the caching issue is logged as a warning instead of failing the run.

  • Fixed an issue when using a Git repository name at GitHub’s maximum supported length (100 characters), so that workflow execution no longer fails during the validation/caching step.