Software Release Notes

This page contains the release notes for the current release. See the subpages for historic release notes.

2025 June 2 - ICA v2.36.0

New Features and Enhancements:

• General

  • Data providers are now redirected to the project details page instead of the project data view, improving navigation.

  • Improved the UI for creating or modifying tools, enhancing usability.

  • There will be a change in the next release where users are no longer able to edit connectors of other users through the API. This will be made consistent with the UI. \

• Data Management

  • .yml extension is now recognized as YAML format.

• Flow

  • The limit of analysis reports has been increased from 20 to 200 per analysis report pattern.

  • Added “dropValueWhenDisabled” as an optional field attribute; if set to true and the field is disabled, its values are excluded from the submitted result.

  • The endpoint GET /api/projects/{projectId}/analyses/{analysisId}/reports now returns report configs with optional titles and matching data. These configs can be used in all POST /api/projects/{projectId}/pipelines:create<pipelinetype>Pipeline endpoints.

  • Added support for searching pipelines by ID in the pipeline grid.

  • The price of aborted analyses is now visible in the UI.

  • New endpoint: POST /api/projects/{projectId}/pipelines/{pipelineId}/generalAttributes to update general attributes of a project pipeline.

  • Users can now create a new output folder directly from the pipeline output selection screen.

  • Added “Standard 3Xlarge” as a new compute type for Flow & Bench.

• Cohorts

  • Cohorts view page now has collapsable items for "show charts" and "query details" on the right corner as an icon thus creating more real estate for cohort subject list.

Fixed Issues

• General

  • Added option to return from editing project and bundle details.

  • Updated the CLI so that the Storage-config-sub-folder is not required when creating a project with your own storage by using the flag --storage-config.

  • Improved information displayed on screen when a public domain non-basespace user tries to access ICA.

  • Improved searching on size of Docker images.

  • Updated tool repository screen to new standard: ▪

    • The selection window for docker images while creating a new tool has been updated to be in line with the new layout.

    • Removed the unnecessary "Technical" option from the tool inputs tab when editing tools.

  • When linking a bundle which includes base to a project that does not have base enabled, the following scenarios apply:

    • Base is not allowed due to entitlements: The bundle will be linked, and you will be given access to the data, pipelines, samples, ... but you will not see the base tables in your project.

    • Base is allowed, but not yet enabled for the project. The bundle will be linked and you will be given access to the data, pipelines, samples, ...but you will not see the base tables in your project and base remains disabled until you enable it.

  • API: /api/projects/{projectId} returns a new attribute projectOwner to identify the current project owner in addition to the existing ownerid of the project creator.

  • Owners of notifications are now able to delete those notification subscriptions. Previously, only the project administrator could do this.

  • Improved error message when trying to share storage credentials from another user.

• Data Management

  • Performance improvement when creating a data copy in batch in the GUI

  • Improved connector resilience when downloading data elements with billing mode project.

  • There will be a change in one of the upcoming releases where users are no longer able to edit connectors of other users through the API. This will be made consistent with the UI.

  • Improved navigation in the edit connector screen.

• Flow

  • The currently selected report file is now highlighted on the reports tab.

  • Fixed an issue which caused show failed steps to fail when opening in an analysis

  • Corrected API documentation for /api/projects/{projectId}/analyses/{analysisId}/outputs

  • Fixed an issue which caused files and folders to not appear correctly when using the grid's search field in the dialog when selecting input files

• Bench

  • Fixed issue which caused object references an unsaved transient instance during preview of new tools in bench workspaces

• Cohorts

  • Fixed issue where RNASeq data ingestions are failing.

  • Fixed issue where UI elements are scrambled upon opening subject timeline view.

  • Fixed issue where PRKN gene not properly loading pertinent information on the variant needle plot

  • Fixed issue where phenotype tabs plot is missing when loading molecular breakdown plot on molecular breakdown tab first. \

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