> For the complete documentation index, see [llms.txt](https://help.connected.illumina.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://help.connected.illumina.com/emedgene/frequently-asked-questions/all-faq.md). # All FAQ {% content-ref url="/pages/vwn6Li7x0K5BOBOgzIJH" %} ["Failed to generate report". What should I do?](/emedgene/frequently-asked-questions/all-faq/failed_to_generate_report_what_should_i_do.md) {% endcontent-ref %} {% content-ref url="/pages/4MxI7QJTfmykKyw0xCJj" %} [Emedgene annotations and update frequency](/emedgene/emedgene-analyze-manual/tertiary-analysis-pipeline/annotation_updates.md) {% endcontent-ref %} {% content-ref url="/pages/yPLfkFwBu7BCjPveTkTt" %} [How do I check my platform version?](/emedgene/emedgene-analyze-manual/settings/organization_settings_-330+/environment/platform-version/how_do_i_check_the_version_of_my_environment.md) {% endcontent-ref %} {% content-ref url="/pages/lMiOoiA2ib0JHBpqLwda" %} [How do I move between organizations?](/emedgene/frequently-asked-questions/all-faq/how_do_i_move_between_organizations.md) {% endcontent-ref %} {% content-ref url="/pages/M6xQVz12QtI2NcRwIP5q" %} [Required format for a BED file defining a kit](/emedgene/emedgene-analyze-manual/settings/organization_settings_-330+/kit-management/bed-files/what_is_the_required_format_for_a_bed_file_defining_a_kit.md) {% endcontent-ref %} {% content-ref url="/pages/n9t9AP6ZimHQmTzNVhk7" %} [Joint calling in Emedgene](/emedgene/emedgene-analyze-manual/tertiary-analysis-pipeline/how_does_joint_calling_work_on_emedgene.md) {% endcontent-ref %} {% content-ref url="/pages/mKVWGkZWPin0ZWNBnp0A" %} [Can I use exome data for CNV detection?](/emedgene/frequently-asked-questions/all-faq/can_i_use_exome_data_for_cnv_detection.md) {% endcontent-ref %} {% content-ref url="/pages/De4MyMNfnjQstmkFK8Kb" %} [Formatting DRAGEN MANTA VCFs for Emedgene](/emedgene/emedgene-analyze-manual/supported-vcfs-variant-callers/how_do_i_prepare_vcf_files_generated_by_dragen_manta_to_be_used_as_input_for_emedgene.md) {% endcontent-ref %} {% content-ref url="/pages/aOAEqyKsV4H0HXuPKsEV" %} [Formatting DRAGEN STR VCF files for Emedgene](/emedgene/emedgene-analyze-manual/supported-vcfs-variant-callers/how_do_i_prepare_vcf_files_generated_by_dragen_str_to_be_used_as_input_for_emedgene.md) {% endcontent-ref %} {% content-ref url="/pages/uteq72YNe99n522kbf1c" %} [How do I analyze mtDNA variants?](/emedgene/frequently-asked-questions/all-faq/how_do_i_analyze_mtdna_variants.md) {% endcontent-ref %} {% content-ref url="/pages/aez0aeGvoJZtOBEbmRPh" %} [Which browser should I use with Emedgene?](/emedgene/emedgene-analyze-manual/troubleshooting/which_browser_should_i_use_with_emedgene.md) {% endcontent-ref %} {% content-ref url="/pages/JSYyRUWbbUjakEKlpyhd" %} [How do I use developer tools to collect logs?](/emedgene/emedgene-analyze-manual/troubleshooting/how_do_i_use_developer_tools_to_collect_logs.md) {% endcontent-ref %} {% content-ref url="/pages/2iCuAQn49aJR1HZnqM21" %} [Can I analyze Illumina Complete Long Reads in Emedgene?](/emedgene/frequently-asked-questions/all-faq/can_i_analyze_illumina_complete_long_reads_in_emedgene.md) {% endcontent-ref %} {% content-ref url="/pages/tjAdsGij6B70JO5XXQll" %} [Source of gnomAD data for small variants on GRCh38](/emedgene/frequently-asked-questions/all-faq/source_of_gnomad_data_for_small_variants_on_grch38.md) {% endcontent-ref %} {% content-ref url="/pages/oLUSnFSSRPnUVuEInxOh" %} [Processing multi-nucleotide variants](/emedgene/emedgene-analyze-manual/tertiary-analysis-pipeline/how_are_mnvs_handled_on_the_platform.md) {% endcontent-ref %} {% content-ref url="/pages/GeUauD2Jundiv3ohxMlf" %} [Support for gene lists with up to 10,000 genes](/emedgene/frequently-asked-questions/all-faq/support_for_gene_lists_with_up_to_10-000_genes.md) {% endcontent-ref %} {% content-ref url="/pages/tNOKgInfb6ropvsL5KHY" %} [Performance issues troubleshooting](/emedgene/emedgene-analyze-manual/troubleshooting/performance_issue_troubleshooting.md) {% endcontent-ref %} {% content-ref url="/pages/n4G4ujyJP0wOvbeLz5j3" %} [Transcript prioritization logic](/emedgene/emedgene-analyze-manual/tertiary-analysis-pipeline/how_does_emedgene_analyze_prioritize_transcripts.md) {% endcontent-ref %} {% content-ref url="/pages/hkCstetFvcwlsWA9jJrz" %} [Variant effect and severity calculation](/emedgene/emedgene-analyze-manual/tertiary-analysis-pipeline/how_does_emedgene_calculate_variant_effect_and_severity.md) {% endcontent-ref %} {% content-ref url="/pages/lPFIJg6YJRAfQI3P77l9" %} [Variant effect filters](/emedgene/emedgene-analyze-manual/reviewing_a_case/analysis-tools-tab-beta-v100.39.0+/filters_presets_panel/filters/simple-filter-operators-mode/variant_effect_filters.md) {% endcontent-ref %} --- # Agent Instructions This documentation is published with GitBook. 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