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  • Get Started
    • Overview
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  • Installation (Connected Insights - Local)
    • Overview
    • Prerequisites
    • Install Connected Insights Software
    • Install Illumina Connected Annotations
    • Install License File
    • Sign In to Connected Insights
    • Install Knowledge Bases
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  • Configuration
    • Overview
    • Automation
    • Custom Actionability Classification
    • Custom Annotations
    • Custom Case Data Definition
    • Disease Configuration
    • Test Definition Setup
    • Variant Flag Groups
    • Variant Filters
    • Preferred Transcripts
    • Pipeline and QC Configuration
    • Reports
      • Templates
      • Customizations
  • APIs
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    • Case APIs
    • Ingest Cloud Analysis Data API (Connected Insights - Cloud Only)
    • Report APIs
    • Audit Log APIs
  • Data Upload
    • Overview
    • Data Upload from User Storage (Connected Insights - Cloud and Connected Insights - Local)
    • Data Upload from ICA (Connected Insights - Cloud)
    • Custom Pipeline Configuration
      • VCF Input Requirement
    • Custom Case Data Upload
    • Assertions Upload
  • Case Management
    • Overview
    • Cases List
    • Case Metada Upload
    • Case Details
      • Merge Cases
    • Overview Tab
    • Visualize Tab
    • Lab QC Tab
    • Report Tab
  • Interpretation
    • Overview
    • Variant Grid
    • Modify Variant Grid
    • IGV Visualizations
    • Transcripts
    • Apply Variant Filters
      • Filter by Variant Category
      • Variant Details Filters
      • Variant Quality Filters
      • Functional Impact Filters
      • Disease Association Filters
      • Variant Frequency Filters
      • Flags Filter
      • Filtering Logic
    • View Variant Details
      • Biological Classification
      • Actionability
      • Clinical Trials
      • Oncogenicity Prediction
      • Visualize
      • Variant Overview
      • Gene Overview
      • Cancer Data Sets
      • Computer Predictors
      • Population
    • Interpret a Variant
    • Edit, Remove, and Archive Assertions
  • Reports
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  • Usage
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    • Administration Console (Connected Insights - Local)
  • Troubleshooting
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    • Data Backup (Connected Insights - Local)
    • Software Errors and Corrective Actions
  • Resources and References
    • Overview
    • Acronyms and Terms
    • Release Notes
  • Technical Assistance
    • Overview
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  1. Case Management

Overview

After uploading secondary analysis results, use Connected Insights to set up filtering, modify table views, and manage the case through the Cases page.

The Cases page provides a quick view of the following information:

  • Cases

  • Case statuses

  • Usage data

This page is used to track the status of cases through your lab, find cases that need attention, or start new cases.

The Cases page displays the number of cases for each case status and sub status.

  • Select a status to open the Cases page with filtered results based on the status.

  • Select the Cases tab to open the Cases page with all cases listed.

  • Select View Storage to open the Usage page in the Illumina Analytics Platform.

Add tags to cases and edit disease information in Connected Insights. For more information, refer to Case Details.

For Connected Insights - Local, the Cases page also displays the following notifications:

  • If your Genome Equivalent Sample balance is low, a notification to contact your administrator or Illumina Technical Support displays.

  • If the storage space in the /staging/ or external mounted directory is below the required space threshold for case ingestion, a notification displays and ingestion stops after reaching capacity. To continue ingestion, free up space.

Do not delete or alter content at the following locations to free up space:

  • /staging/ici

  • /<mountedDrive>/d53e4b2d-0428-4b3e-92bf-955f7153c360

  • /<mountedDrive>/ici_<ServerHostname>/

    These locations contain Connected Insights -generated files. If these files are deleted, new cases cannot be processed or case results may not be available.

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Last updated 1 year ago

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