Overview

This section describes how to upload data with Connected Insights and includes setup instructions. Connected Insights requires the following data types:

• Secondary analysis output data — Connected Insights is compatible with a broad range of analysis pipeline outputs. To configure the input file format, select a compatible pipeline (for example, DRAGEN TruSight Oncology 500 v2.5.2) or configure a custom pipeline.

• Case, subject, and sample data — For more information on custom case data, refer to Custom Case Data Upload

Connected Insights - Cloud allows data upload from the following sources:

• User storage — Data ingestion is managed by the Data Uploader tool that supports uploading variant call format (VCF) files and other analysis output files. For more information, refer to Data Upload from User Storage (Connected Insights - Local Storage).

• Cloud storage on ICA — Data ingestion can be configured through the Data Upload page or API. For more information on using the Data Upload tab or API, refer to Data Upload from ICA (Connected Insights - Cloud).

Before uploading, create the following items:

• Custom case data (if applicable)

• Test components

• Test definitions For more information on creating test components and definitions, refer to Test Definition Setup.