NGS Extensions v5.23.0

Last Updated: November 2024

Release Date: September 2023

Document Version: 2

These release notes detail the key changes to software components for the Next Generation Sequencing (NGS) Extensions Package v5.23.0.

Compatibility

Refer to Compatibility under Instruments & Integrations.

New Features

  • Updates Java and third-party dependency libraries.

  • Updates Groovy to v3.0.7.

  • Stopwatch parameter -s is replaced with the -stopwatch parameter for NGS 5.21.0 and later.

Defects Fixed

  • The sample sheet for the MiSeq now shows the following information:

    • The pool name instead of the sample name when the pool contains only one sample.

    • The well and plate information for submitted samples instead of for libraries.

  • Fixed issue where the template file generator created duplicate lines for the first data source entry when using multiple data sources.

  • Fixed issue where the driver file generator did not append the existing log file.

  • The changeWorkflow script on the No Output step reflects the correct number of samples being routed.

  • Fixed the Insecure Input Validation (SRCCLR-SID-22742) vulnerability.

  • Fixed degradation of the LLTK script performance when updating the custom field with an empty string.

  • Fixed degradation of the log file download performance when automation performs write actions on an existing log file.

  • Improved the LLTK script error messages to show details of artifacts.

Known Issues

  • An error occurs when reformatting the date using the Lab Logic Toolkit with the Date utility class. The date reformatting can be done with java.time instead.

Revision History

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