Variant page
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Individual case page > Analysis tools tab > Variant table > Variant page
The Variant page showcasing the comprehensive variant information is accessible from the by selecting the corresponding variant row with a click. Once you're on the Variant page, you can move between variants using left and right arrow keys of your keyboard.
. Displays Case ID, gene symbol, genomic DNA-level description of the variant, variant , and a link to your database. If the variant is already in your Curate database, you will see an Open Curate button. Otherwise, you will see an Export to Curate button.
Navigation panel (left). Divided into five tabs, leading to the corresponding page sections.
Page body:
. Highlights core variant-related information from other sections
. Reports essential variant- and gene-level information and indicates gene-related diseases.
. Outlines the major variant quality parameters in each sample and demonstrates the family tree with the zygosity for each sequenced sample.
. Features the IGV-based BAM file viewer.
. Addresses alternative allele frequency, alternative allele count, and the number of homozygotes in public and internal databases.
. Displays statistics regarding the pathogenicity and tags assigned to the variant under review, incorporating data from previous cases within both your organization and .
. Highlights user-selected variant pathogenicity, ACMG class (for a or a variant), and interpretation notes.
(right). Records variant-level user activities, such as a variant, adding comments or evidence notes, or editing the evidence graph. Variant activity panel pops up upon clicking the Activities button.
